Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI95514.1 | BAI95516.1 | SJA_C1-06800 | SJA_C1-06820 | Hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0235 family. | 0.854 |
BAI95514.1 | BAI95517.1 | SJA_C1-06800 | SJA_C1-06830 | Hypothetical protein. | Conserved hypothetical protein; Putative integral membrane protein. | 0.854 |
BAI95514.1 | BAI95519.1 | SJA_C1-06800 | SJA_C1-06850 | Hypothetical protein. | Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.442 |
BAI95514.1 | argB | SJA_C1-06800 | SJA_C1-06840 | Hypothetical protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.562 |
BAI95514.1 | folD | SJA_C1-06800 | SJA_C1-06810 | Hypothetical protein. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.868 |
BAI95514.1 | marC | SJA_C1-06800 | SJA_C1-06790 | Hypothetical protein. | MarC-family membrane protein; Multiple antibiotic resistance protein / integral membrane protein of the MarC family. | 0.864 |
BAI95516.1 | BAI95514.1 | SJA_C1-06820 | SJA_C1-06800 | Conserved hypothetical protein; Belongs to the UPF0235 family. | Hypothetical protein. | 0.854 |
BAI95516.1 | BAI95517.1 | SJA_C1-06820 | SJA_C1-06830 | Conserved hypothetical protein; Belongs to the UPF0235 family. | Conserved hypothetical protein; Putative integral membrane protein. | 0.906 |
BAI95516.1 | BAI95519.1 | SJA_C1-06820 | SJA_C1-06850 | Conserved hypothetical protein; Belongs to the UPF0235 family. | Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.646 |
BAI95516.1 | argB | SJA_C1-06820 | SJA_C1-06840 | Conserved hypothetical protein; Belongs to the UPF0235 family. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.683 |
BAI95516.1 | folD | SJA_C1-06820 | SJA_C1-06810 | Conserved hypothetical protein; Belongs to the UPF0235 family. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.871 |
BAI95516.1 | marC | SJA_C1-06820 | SJA_C1-06790 | Conserved hypothetical protein; Belongs to the UPF0235 family. | MarC-family membrane protein; Multiple antibiotic resistance protein / integral membrane protein of the MarC family. | 0.854 |
BAI95517.1 | BAI95514.1 | SJA_C1-06830 | SJA_C1-06800 | Conserved hypothetical protein; Putative integral membrane protein. | Hypothetical protein. | 0.854 |
BAI95517.1 | BAI95516.1 | SJA_C1-06830 | SJA_C1-06820 | Conserved hypothetical protein; Putative integral membrane protein. | Conserved hypothetical protein; Belongs to the UPF0235 family. | 0.906 |
BAI95517.1 | BAI95519.1 | SJA_C1-06830 | SJA_C1-06850 | Conserved hypothetical protein; Putative integral membrane protein. | Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.553 |
BAI95517.1 | argB | SJA_C1-06830 | SJA_C1-06840 | Conserved hypothetical protein; Putative integral membrane protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.684 |
BAI95517.1 | folD | SJA_C1-06830 | SJA_C1-06810 | Conserved hypothetical protein; Putative integral membrane protein. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.858 |
BAI95517.1 | gltB | SJA_C1-06830 | SJA_C1-02400 | Conserved hypothetical protein; Putative integral membrane protein. | Glutamate synthase (NADPH) large chain. | 0.420 |
BAI95517.1 | marC | SJA_C1-06830 | SJA_C1-06790 | Conserved hypothetical protein; Putative integral membrane protein. | MarC-family membrane protein; Multiple antibiotic resistance protein / integral membrane protein of the MarC family. | 0.854 |
BAI95519.1 | BAI95514.1 | SJA_C1-06850 | SJA_C1-06800 | Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Hypothetical protein. | 0.442 |
page 1 of 3